PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0483.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 417aa    MW: 47240.7 Da    PI: 6.5116
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0483.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.91.8e-201261882586
             trihelix  25 klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                           +kk++W+++sk+m+ergf +sp+qC++k+++lnkryk+++++ +++ +++++++  ++d ++
  Kaladp0045s0483.3.p 126 MQKKGKWKSISKVMAERGFYVSPQQCEDKFNDLNKRYKRLNDILGRGtSCQVVEKPELLDMMD 188
                          39*********************************************6699999999999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-17127214No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MEGNLNMVPG GGSYGGGLDQ QGSMRYNHHH RPSSHAVTDN DLRQGPALHP SIHDVFPPFT  60
VGTMQDCGDR SLSLADYNKA ERARNVTSDD DEPGVMEDAG NCHNGGQDAS SGYRGGGGGR  120
MKFALMQKKG KWKSISKVMA ERGFYVSPQQ CEDKFNDLNK RYKRLNDILG RGTSCQVVEK  180
PELLDMMDHL SEKSKEDVRK ILSSKHLFYE EMCSYHNGNR LHLPHDPALQ RALHLALESR  240
EMSEISDGRR KSVDDYDEDD HGGESDDCDE FEECHVAHGD SRALCGVMEG SSAKRTKQDL  300
SHDEFSFGNA QEGCKISQLN TQNVHIAMNQ AYPEGSKSAW YNSQMMQSRS LKLEEKRTKI  360
QMEMLELEKQ RLKWQRFSKK KDRELEKMRL ENERMKLENE SMALELKRRE IGLKGD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006473052.11e-163PREDICTED: uncharacterized protein LOC102612442
TrEMBLV4V6N51e-163V4V6N5_9R
TrEMBLA0A067GYJ61e-163A0A067GYJ6_CITSI; Uncharacterized protein
STRINGVIT_18s0072g00690.t011e-159(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-117sequence-specific DNA binding transcription factors